Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain AF39-11
Accession NumberQROI00000000.1
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dna primase/helicase | DW035_16195 | Not Available | - | 3707403 - 3709240 | 67872.5 |
| duf2262 domain-containing protein | DW035_16200 | Not Available | - | 3709273 - 3709788 | 19829.4 |
| duf4303 domain-containing protein | DW035_16205 | Not Available | - | 3709888 - 3710397 | 19861.4 |
| hypothetical protein | DW035_16210 | Not Available | - | 3710477 - 3711358 | 34631.4 |
| hypothetical protein | DW035_16215 | Not Available | - | 3711495 - 3711899 | 15894.7 |
| hypothetical protein | DW035_16220 | Not Available | - | 3711984 - 3712709 | 27432.3 |
| hypothetical protein | DW035_16225 | Not Available | - | 3712778 - 3713404 | 24350.2 |
| hypothetical protein | DW035_16230 | Not Available | - | 3713456 - 3713916 | 18024.1 |
| hypothetical protein | DW035_16235 | Not Available | - | 3714009 - 3714482 | 17608.1 |
| hypothetical protein | DW035_16240 | Not Available | - | 3714586 - 3715179 | 23063.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
