Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain AF39-11
Accession NumberQROI00000000.1
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| smi1/knr4 family protein | DW035_16075 | Not Available | - | 3688401 - 3689342 | 36547.2 |
| hypothetical protein | DW035_16080 | Not Available | - | 3689413 - 3690081 | 26286.5 |
| hypothetical protein | DW035_16085 | Not Available | - | 3690160 - 3690540 | 14609.5 |
| hypothetical protein | DW035_16090 | Not Available | + | 3690741 - 3691412 | 25924.4 |
| hypothetical protein | DW035_16095 | Not Available | + | 3691445 - 3692086 | 24119.4 |
| hypothetical protein | DW035_16100 | Not Available | + | 3692086 - 3692634 | 20215.7 |
| hypothetical protein | DW035_16105 | Not Available | + | 3692859 - 3693446 | 22979.0 |
| duf4375 domain-containing protein | DW035_16110 | Not Available | + | 3693676 - 3694128 | 17795.9 |
| hypothetical protein | DW035_16115 | Not Available | + | 3694177 - 3694740 | 22600.2 |
| duf1911 domain-containing protein | DW035_16120 | Not Available | + | 3694793 - 3695548 | 29473.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
