Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain AF39-11
Accession NumberQROI00000000.1
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_15960 | Not Available | + | 3673617 - 3675497 | 73004.2 |
| hypothetical protein | DW035_15970 | Not Available | + | 3675979 - 3676650 | 26008.4 |
| duf4948 domain-containing protein | DW035_15975 | Not Available | + | 3676669 - 3677259 | 22359.2 |
| hypothetical protein | DW035_15980 | Not Available | - | 3677178 - 3677456 | 10546.6 |
| ferredoxin | DW035_15985 | Not Available | - | 3677453 - 3678247 | 29725.1 |
| transcriptional regulator | DW035_15990 | Not Available | + | 3678372 - 3678725 | 13934.9 |
| rna helicase | DW035_15995 | Not Available | + | 3678978 - 3679406 | 15016.7 |
| dna-binding protein | DW035_16005 | Not Available | + | 3679604 - 3679738 | 5466.54 |
| smi1/knr4 family protein | DW035_16015 | Not Available | + | 3680278 - 3680916 | 24393.8 |
| hypothetical protein | DW035_16020 | Not Available | + | 3680971 - 3681660 | 26756.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
