Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis strain AF39-14AC
Accession NumberQROF00000000.1
Gene Summary
Adenine Count
1018114 bp
Thymine Count
948196 bp
Guanine Count
732739 bp
Cytosine Count
640694 bp
Genome Length
3340353 bp
Protein-coding Genes
3021 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome-recycling factor | DW038_01665 | Not Available | + | 346028 - 346582 | 20705.8 |
| isoprenyl transferase | DW038_01670 | Not Available | + | 346738 - 347463 | 27398.4 |
| phosphatidate cytidylyltransferase | DW038_01675 | Not Available | + | 347463 - 348266 | 29732.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DW038_01680 | Not Available | + | 348351 - 349493 | 41508.4 |
| rip metalloprotease rsep | DW038_01685 | Not Available | + | 349505 - 350542 | 38193.1 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DW038_01690 | Not Available | + | 350569 - 351615 | 36901.2 |
| polc-type dna polymerase iii | DW038_01695 | Not Available | + | 351618 - 356162 | 171311.0 |
| xanthine phosphoribosyltransferase | DW038_01700 | Not Available | - | 356297 - 356875 | 21571.0 |
| hypothetical protein | DW038_01705 | Not Available | - | 356917 - 357408 | 18433.5 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DW038_01710 | Not Available | + | 357455 - 357934 | 18318.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.