Agathobacter rectalis strain AF39-14AC

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain AF39-14AC is a Gram-positive, non-motile, and anaerobic bacterium characterized by its rod-shaped morphology. This strain is classified as a chemoheterotroph, indicating that it derives its energy from organic compounds. It thrives optimally at a temperature of 37°C, positioning it within the mesophilic range, which is typical for many human-associated microorganisms. The strain has a single replicon and a single membrane, adhering to the basic characteristics of many bacteria. It does not form spores, which may influence its survival strategies and ecological interactions in various habitats. Agathobacter rectalis is known to have a free-living biotic relationship, suggesting it exists independently rather than as a symbiont or pathogen. The strain has been identified in association with Homo sapiens, highlighting its relevance to human microbiota. Its role within the gut ecosystem may be significant, as many members of the genus Agathobacter are involved in the fermentation of dietary fibers, contributing to gut health and metabolic processes. In summary, Agathobacter rectalis strain AF39-14AC exemplifies the diversity of anaerobic bacteria that inhabit human environments, playing a potential role in maintaining gut microbial balance and influencing overall health through its metabolic activities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain AF39-14AC

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain AF39-14AC
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain AF39-14AC AF39-14AC.Scaf73, whole

Gene Summary

Adenine Count

1018114 bp

Thymine Count

948196 bp

Guanine Count

732739 bp

Cytosine Count

640694 bp

Genome Length

3340353 bp

Protein-coding Genes

3021 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidyl-prolyl cis-trans isomeraseDW038_12670Not AvailablePositive2619215 - 262043545144.8
shikimate kinaseDW038_12675Not AvailablePositive2620419 - 262092518655.7
udp-n-acetylglucosamine 1-carboxyvinyltransferaseDW038_12680Not AvailablePositive2621116 - 262240846378.4
hd domain-containing proteinDW038_12685Not AvailableNegative2622543 - 262367342181.5
methionine adenosyltransferaseDW038_12690Not AvailablePositive2624123 - 262530443006.3
dna-binding response regulatorDW038_12695Not AvailablePositive2625437 - 262612626124.5
sensor histidine kinaseDW038_12700Not AvailablePositive2626250 - 262774956351.8
mate family efflux transporterDW038_12705Not AvailablePositive2627975 - 262936050281.7
16s rrna (cytosine(1402)-n(4))-methyltransferaseDW038_12710Not AvailablePositive2629459 - 263050839416.2
formate c-acetyltransferaseDW038_12715Not AvailablePositive2630829 - 263308184633.5

Displaying genes 2411 – 2420 of 3080 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.