Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | strain AF39-14AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1018114 bp
Thymine Count
948196 bp
Guanine Count
732739 bp
Cytosine Count
640694 bp
Genome Length
3340353 bp
Protein-coding Genes
3021 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase | DW038_12670 | Not Available | Positive | 2619215 - 2620435 | 45144.8 |
| shikimate kinase | DW038_12675 | Not Available | Positive | 2620419 - 2620925 | 18655.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DW038_12680 | Not Available | Positive | 2621116 - 2622408 | 46378.4 |
| hd domain-containing protein | DW038_12685 | Not Available | Negative | 2622543 - 2623673 | 42181.5 |
| methionine adenosyltransferase | DW038_12690 | Not Available | Positive | 2624123 - 2625304 | 43006.3 |
| dna-binding response regulator | DW038_12695 | Not Available | Positive | 2625437 - 2626126 | 26124.5 |
| sensor histidine kinase | DW038_12700 | Not Available | Positive | 2626250 - 2627749 | 56351.8 |
| mate family efflux transporter | DW038_12705 | Not Available | Positive | 2627975 - 2629360 | 50281.7 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | DW038_12710 | Not Available | Positive | 2629459 - 2630508 | 39416.2 |
| formate c-acetyltransferase | DW038_12715 | Not Available | Positive | 2630829 - 2633081 | 84633.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

