Agathobacter rectalis strain AF39-14AC

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain AF39-14AC is a Gram-positive, non-motile, and anaerobic bacterium characterized by its rod-shaped morphology. This strain is classified as a chemoheterotroph, indicating that it derives its energy from organic compounds. It thrives optimally at a temperature of 37°C, positioning it within the mesophilic range, which is typical for many human-associated microorganisms. The strain has a single replicon and a single membrane, adhering to the basic characteristics of many bacteria. It does not form spores, which may influence its survival strategies and ecological interactions in various habitats. Agathobacter rectalis is known to have a free-living biotic relationship, suggesting it exists independently rather than as a symbiont or pathogen. The strain has been identified in association with Homo sapiens, highlighting its relevance to human microbiota. Its role within the gut ecosystem may be significant, as many members of the genus Agathobacter are involved in the fermentation of dietary fibers, contributing to gut health and metabolic processes. In summary, Agathobacter rectalis strain AF39-14AC exemplifies the diversity of anaerobic bacteria that inhabit human environments, playing a potential role in maintaining gut microbial balance and influencing overall health through its metabolic activities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain AF39-14AC

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain AF39-14AC
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain AF39-14AC


Gene Summary

Adenine Count

1018114 bp

Thymine Count

948196 bp

Guanine Count

732739 bp

Cytosine Count

640694 bp

Genome Length

3340353 bp

Protein-coding Genes

3021 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative manganese-dependent inorganic diphosphataseDW038_05365Not AvailablePositive1096879 - 109852861101.6
arac family transcriptional regulatorDW038_05370Not AvailableNegative1098578 - 109941432154.3
diaminopimelate epimeraseDW038_05375Not AvailablePositive1099565 - 110042231767.8
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseDW038_05380Not AvailablePositive1100540 - 110201254489.5
4-hydroxy-tetrahydrodipicolinate synthaseDW038_05385Not AvailablePositive1102062 - 110294631551.3
flavin reductase family proteinDW038_05390Not AvailablePositive1102993 - 110356220874.2
duf4364 family proteinDW038_05395Not AvailableNegative1103564 - 110407919812.3
tigr01212 family radical sam proteinDW038_05400Not AvailableNegative1104091 - 110499934225.4
nadp-dependent malic enzymeDW038_05405Not AvailableNegative1105001 - 110614940857.3
transcription termination factor rhoDW038_05410Not AvailablePositive1106420 - 110776049991.3

Displaying genes 1021 – 1030 of 3080 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.