Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DW048_00015 | Not Available | Positive | 3767 - 5380 | 60713.8 |
| hsdr family type i site-specific deoxyribonuclease | DW048_00020 | Not Available | Positive | 5382 - 8513 | 119544.0 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 6993 - 7362 | Not Available |
| m48 family peptidase | DW048_00025 | Not Available | Positive | 8513 - 9208 | 27362.5 |
| mobilization protein | DW048_00030 | Not Available | Negative | 10230 - 11300 | 40203.8 |
| dna-binding protein | DW048_00035 | Not Available | Negative | 11305 - 11679 | 14312.3 |
| hypothetical protein | DW048_00040 | Not Available | Negative | 11753 - 12544 | 29786.3 |
| site-specific integrase | DW048_00045 | Not Available | Negative | 12713 - 13828 | 43610.5 |
| dna-binding protein | DW048_00050 | Not Available | Negative | 13948 - 14823 | 34862.1 |
| hypothetical protein | DW048_00055 | Not Available | Positive | 15165 - 15371 | 7721.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

