Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit i | DW048_05860 | Not Available | Negative | 1314765 - 1315217 | 16944.7 |
| nadh-quinone oxidoreductase subunit h | DW048_05865 | Not Available | Negative | 1315217 - 1316293 | 40265.7 |
| nadh-quinone oxidoreductase subunit c/d | DW048_05870 | Not Available | Negative | 1316417 - 1317976 | 59743.6 |
| nadh-quinone oxidoreductase subunit b | DW048_05875 | Not Available | Negative | 1317973 - 1318569 | 22081.9 |
| nadh-quinone oxidoreductase subunit a | DW048_05880 | Not Available | Negative | 1318560 - 1318910 | 13099.5 |
| hypothetical protein | DW048_05885 | Not Available | Negative | 1319014 - 1319391 | 14644.8 |
| trkh family potassium uptake protein | DW048_05890 | Not Available | Negative | 1319494 - 1320948 | 53478.3 |
| trk system potassium transporter trka | DW048_05895 | Not Available | Negative | 1320948 - 1322288 | 49307.5 |
| gscfa domain protein | DW048_05905 | Not Available | Positive | 1324291 - 1325277 | 38641.5 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | DW048_05910 | Not Available | Positive | 1325253 - 1327718 | 92786.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

