Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_05780 | Not Available | Negative | 1300384 - 1300755 | 13690.4 |
| hypothetical protein | DW048_05785 | Not Available | Positive | 1301223 - 1301882 | 24450.2 |
| m23 family peptidase | DW048_05790 | Not Available | Positive | 1301892 - 1302515 | 22827.6 |
| porin family protein | DW048_05800 | Not Available | Positive | 1302914 - 1303450 | 19608.1 |
| port family protein | DW048_05805 | Not Available | Positive | 1303653 - 1304258 | 21310.4 |
| port family protein | DW048_05810 | Not Available | Positive | 1304405 - 1305076 | 24189.6 |
| atp-binding protein | DW048_05825 | Not Available | Positive | 1307400 - 1307642 | 8923.97 |
| glucuronyl hydrolase | DW048_05830 | Not Available | Negative | 1307644 - 1308870 | 46672.1 |
| nadh-quinone oxidoreductase subunit nuok | DW048_05850 | Not Available | Negative | 1313932 - 1314240 | 11758.6 |
| nadh-quinone oxidoreductase subunit j | DW048_05855 | Not Available | Negative | 1314246 - 1314749 | 18224.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

