Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DW048_05705 | Not Available | Negative | 1282071 - 1282901 | 32277.9 |
| tolc family protein | DW048_05720 | Not Available | Positive | 1287383 - 1288756 | 50273.8 |
| duf4934 domain-containing protein | DW048_05725 | Not Available | Negative | 1288837 - 1290069 | 46167.9 |
| duf3332 domain-containing protein | DW048_05730 | Not Available | Negative | 1290150 - 1290701 | 19885.5 |
| mfs transporter | DW048_05735 | Not Available | Positive | 1290875 - 1292263 | 51163.3 |
| duf4831 family protein | DW048_05740 | Not Available | Negative | 1292345 - 1293394 | 38630.6 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | DW048_05745 | Not Available | Negative | 1293431 - 1294966 | 56205.5 |
| hypoxanthine phosphoribosyltransferase | DW048_05750 | Not Available | Positive | 1295086 - 1295622 | 20092.5 |
| peptidoglycan editing factor pgef | DW048_05765 | Not Available | Positive | 1297527 - 1298309 | 28753.3 |
| hypothetical protein | DW048_05775 | Not Available | Positive | 1299397 - 1300344 | 36404.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

