Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor | DW048_05520 | Not Available | Negative | 1243963 - 1244301 | 12663.2 |
| redox-sensing transcriptional repressor rex | DW048_05525 | Not Available | Positive | 1244419 - 1245069 | 24251.6 |
| faa hydrolase family protein | DW048_05530 | Not Available | Positive | 1245074 - 1245691 | 23340.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DW048_05535 | Not Available | Positive | 1245688 - 1246170 | 17406.1 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | DW048_05540 | Not Available | Negative | 1246221 - 1247111 | 32692.7 |
| metallophosphoesterase | DW048_05545 | Not Available | Positive | 1247185 - 1248024 | 31352.6 |
| duf3836 domain-containing protein | DW048_05550 | Not Available | Positive | 1248251 - 1248721 | 18198.9 |
| nicotinate-nucleotide adenylyltransferase | DW048_05555 | Not Available | Negative | 1248804 - 1249376 | 22162.7 |
| hypothetical protein | DW048_05560 | Not Available | Negative | 1249358 - 1249540 | 6793.87 |
| guanylate kinase | DW048_05565 | Not Available | Negative | 1249545 - 1250114 | 21367.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

