Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_05405 | Not Available | Positive | 1222860 - 1223087 | 8867.94 |
| hypothetical protein | DW048_05410 | Not Available | Positive | 1223162 - 1223566 | 15247.7 |
| mota/tolq/exbb proton channel family protein | DW048_05415 | Not Available | Positive | 1223677 - 1224492 | 28947.5 |
| biopolymer transporter exbd | DW048_05420 | Not Available | Positive | 1224521 - 1225126 | 22800.8 |
| biopolymer transporter exbd | DW048_05425 | Not Available | Positive | 1225139 - 1225789 | 24262.1 |
| energy transducer tonb | DW048_05430 | Not Available | Positive | 1225819 - 1226631 | 30370.9 |
| phosphate abc transporter substrate-binding protein | DW048_05435 | Not Available | Positive | 1226644 - 1227585 | 34159.4 |
| tetratricopeptide repeat protein | DW048_05440 | Not Available | Positive | 1227609 - 1229024 | 53394.0 |
| atp-binding cassette domain-containing protein | DW048_05445 | Not Available | Positive | 1229210 - 1230052 | 31403.1 |
| hypothetical protein | DW048_05450 | Not Available | Positive | 1230067 - 1230960 | 34133.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

