Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23 family peptidase | DW048_00305 | Not Available | Positive | 56352 - 56978 | 23136.6 |
| hypothetical protein | DW048_00310 | Not Available | Negative | 56971 - 58485 | 58259.3 |
| duf1810 family protein | DW048_00315 | Not Available | Negative | 58522 - 59820 | 48979.2 |
| xre family transcriptional regulator | DW048_00320 | Not Available | Negative | 59945 - 60151 | 7792.49 |
| tetratricopeptide repeat protein | DW048_00325 | Not Available | Negative | 60148 - 62205 | 77846.8 |
| hypothetical protein | DW048_00335 | Not Available | Negative | 65228 - 65728 | 19114.0 |
| hypothetical protein | DW048_00340 | Not Available | Negative | 65734 - 66561 | 31144.4 |
| prsw family intramembrane metalloprotease | DW048_00345 | Not Available | Negative | 66568 - 67602 | 39150.6 |
| kinase | DW048_00355 | Not Available | Negative | 68774 - 70249 | 56080.3 |
| protein phosphatase 2c domain-containing protein | DW048_00360 | Not Available | Negative | 70262 - 71812 | 58720.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

