Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | DW048_05285 | Not Available | Positive | 1189081 - 1190112 | 36079.6 |
| abc transporter atp-binding protein | DW048_05290 | Not Available | Positive | 1190112 - 1191119 | 37199.9 |
| threonine synthase | DW048_05300 | Not Available | Negative | 1191711 - 1193012 | 47693.9 |
| cofactor-independent phosphoglycerate mutase | DW048_05305 | Not Available | Negative | 1193103 - 1194314 | 44539.4 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | DW048_05310 | Not Available | Negative | 1194319 - 1196751 | 88625.7 |
| dna repair protein rada | DW048_05315 | Not Available | Positive | 1197279 - 1198646 | 49904.5 |
| duf1847 domain-containing protein | DW048_05320 | Not Available | Positive | 1198686 - 1199336 | 24388.4 |
| fad-binding protein | DW048_05325 | Not Available | Positive | 1199342 - 1200985 | 60726.7 |
| luxr family transcriptional regulator | DW048_05330 | Not Available | Positive | 1201113 - 1201733 | 23357.5 |
| tonb-dependent receptor | DW048_05335 | Not Available | Positive | 1201903 - 1204329 | 92201.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

