Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase | DW048_05230 | Not Available | Positive | 1177261 - 1178328 | 39929.6 |
| hypothetical protein | DW048_05235 | Not Available | Positive | 1178361 - 1178549 | 7491.98 |
| sialidase | DW048_05240 | Not Available | Negative | 1178535 - 1180244 | 64005.9 |
| fadr family transcriptional regulator | DW048_05245 | Not Available | Negative | 1180250 - 1180996 | 28695.9 |
| hypothetical protein | DW048_05250 | Not Available | Positive | 1181161 - 1181445 | 11793.8 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | DW048_05255 | Not Available | Positive | 1181562 - 1182335 | 29390.4 |
| alpha/beta hydrolase | DW048_05260 | Not Available | Negative | 1182573 - 1183544 | 34892.6 |
| tonb-dependent receptor | DW048_05265 | Not Available | Positive | 1184097 - 1186118 | 76728.7 |
| hypothetical protein | DW048_05270 | Not Available | Positive | 1186132 - 1187274 | 41076.3 |
| abc transporter substrate-binding protein | DW048_05280 | Not Available | Positive | 1187838 - 1188965 | 41848.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

