Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DW048_05105 | Not Available | Positive | 1152130 - 1152777 | 24840.1 |
| alanine:cation symporter family protein | DW048_05110 | Not Available | Positive | 1152783 - 1154183 | 51010.3 |
| Trna-trp | Not Available | Not Available | Positive | 1155617 - 1155692 | Not Available |
| radical sam protein | DW048_05130 | Not Available | Negative | 1155749 - 1156294 | 20465.4 |
| 6-carboxytetrahydropterin synthase qued | DW048_05135 | Not Available | Negative | 1156281 - 1156613 | 12835.3 |
| duf454 domain-containing protein | DW048_05140 | Not Available | Positive | 1156748 - 1157110 | 14082.9 |
| hypothetical protein | DW048_05145 | Not Available | Positive | 1157283 - 1157576 | 11779.2 |
| cell division protein zapa | DW048_05150 | Not Available | Positive | 1157606 - 1157899 | 11772.0 |
| ribonuclease y | DW048_05155 | Not Available | Positive | 1158000 - 1159535 | 57327.7 |
| hypothetical protein | DW048_05160 | Not Available | Positive | 1159728 - 1160528 | 30042.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

