Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 1136476 - 1136563 | Not Available |
| transposase | DW048_05045 | Not Available | Negative | 1136698 - 1136870 | 6522.78 |
| mobilization protein | DW048_05050 | Not Available | Positive | 1136871 - 1137590 | 28126.8 |
| hypothetical protein | DW048_05060 | Not Available | Positive | 1137897 - 1138394 | 18084.0 |
| hypothetical protein | DW048_05065 | Not Available | Positive | 1138414 - 1139073 | 25073.6 |
| Trna-ser | Not Available | Not Available | Positive | 1141913 - 1142000 | Not Available |
| arac family transcriptional regulator | DW048_05080 | Not Available | Positive | 1142133 - 1143884 | 68484.7 |
| serine dehydratase subunit alpha family protein | DW048_05090 | Not Available | Positive | 1146240 - 1147535 | 46076.9 |
| n-acetyltransferase | DW048_05095 | Not Available | Negative | 1147610 - 1147888 | 10514.7 |
| helix-turn-helix domain-containing protein | DW048_05100 | Not Available | Negative | 1148038 - 1151997 | 149379.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

