Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_04990 | Not Available | Negative | 1128085 - 1129482 | 52252.0 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DW048_04995 | Not Available | Negative | 1129609 - 1130661 | 39628.4 |
| peptide chain release factor n(5)-glutamine methyltransferase | DW048_05000 | Not Available | Positive | 1130706 - 1131542 | 31851.5 |
| recx family transcriptional regulator | DW048_05005 | Not Available | Positive | 1131544 - 1132029 | 18909.9 |
| comf family protein | DW048_05010 | Not Available | Positive | 1132010 - 1132705 | 26096.9 |
| orotate phosphoribosyltransferase | DW048_05015 | Not Available | Positive | 1132805 - 1133443 | 23412.4 |
| srpbcc family protein | DW048_05020 | Not Available | Positive | 1133541 - 1133945 | 15197.6 |
| argininosuccinate lyase | DW048_05025 | Not Available | Positive | 1133960 - 1135300 | 50611.4 |
| l-glyceraldehyde 3-phosphate reductase | DW048_05030 | Not Available | Positive | 1135324 - 1136316 | 36701.9 |
| Trna-gly | Not Available | Not Available | Positive | 1136387 - 1136459 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

