Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_04815 | Not Available | Positive | 1088325 - 1089371 | 39307.3 |
| duf4906 domain-containing protein | DW048_04825 | Not Available | Positive | 1090534 - 1092648 | 78746.7 |
| hypothetical protein | DW048_04830 | Not Available | Positive | 1092666 - 1092911 | 9361.5 |
| hypothetical protein | DW048_04835 | Not Available | Positive | 1092923 - 1093222 | 12076.5 |
| 30s ribosomal protein s15 | DW048_04840 | Not Available | Positive | 1093503 - 1093772 | 10337.5 |
| s-ribosylhomocysteine lyase | DW048_04845 | Not Available | Negative | 1093875 - 1094360 | 18473.2 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | DW048_04850 | Not Available | Negative | 1094372 - 1095067 | 25496.5 |
| hypothetical protein | DW048_04855 | Not Available | Positive | 1095152 - 1097644 | 93006.4 |
| glycosyltransferase | DW048_04860 | Not Available | Negative | 1097670 - 1098416 | 28692.4 |
| glycosyltransferase | DW048_04865 | Not Available | Negative | 1098409 - 1099671 | 47697.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

