Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 1069335 - 1069406 | Not Available |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | DW048_04755 | Not Available | Positive | 1069945 - 1071792 | 66247.6 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | DW048_04760 | Not Available | Positive | 1071816 - 1072820 | 36538.8 |
| uracil phosphoribosyltransferase | DW048_04765 | Not Available | Negative | 1072978 - 1073637 | 24410.4 |
| phosphoenolpyruvate carboxykinase (atp) | DW048_04770 | Not Available | Positive | 1073898 - 1075505 | 59108.1 |
| proton-conducting membrane transporter | DW048_04775 | Not Available | Positive | 1075611 - 1076261 | 23930.1 |
| translational gtpase typa | DW048_04780 | Not Available | Negative | 1076318 - 1078120 | 67346.3 |
| duf3575 domain-containing protein | DW048_04800 | Not Available | Positive | 1083702 - 1084271 | 21771.4 |
| duf3868 domain-containing protein | DW048_04805 | Not Available | Positive | 1084284 - 1085744 | 54285.8 |
| hypothetical protein | DW048_04810 | Not Available | Positive | 1086543 - 1088240 | 62999.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

