Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_04695 | Not Available | Negative | 1061777 - 1063738 | 73387.3 |
| hypothetical protein | DW048_04700 | Not Available | Negative | 1063740 - 1064024 | 10723.1 |
| hypothetical protein | DW048_04705 | Not Available | Negative | 1064028 - 1064240 | 7949.71 |
| luxr family transcriptional regulator | DW048_04710 | Not Available | Negative | 1064255 - 1064806 | 21699.9 |
| xre family transcriptional regulator | DW048_04715 | Not Available | Negative | 1064803 - 1065048 | 9083.37 |
| helix-turn-helix domain-containing protein | DW048_04720 | Not Available | Positive | 1065193 - 1065636 | 16906.5 |
| hypothetical protein | DW048_04725 | Not Available | Positive | 1065667 - 1065867 | 7748.41 |
| hypothetical protein | DW048_04730 | Not Available | Positive | 1065891 - 1066124 | 9240.35 |
| hypothetical protein | DW048_04735 | Not Available | Negative | 1066285 - 1066530 | 9084.24 |
| hypothetical protein | DW048_04740 | Not Available | Positive | 1066893 - 1067312 | 15689.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

