Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate transport system regulatory protein phou | DW048_04460 | Not Available | Positive | 1028276 - 1028977 | 26659.2 |
| carboxypeptidase-like regulatory domain-containing protein | DW048_04465 | Not Available | Positive | 1029379 - 1031952 | 99185.7 |
| atp-binding cassette domain-containing protein | DW048_04470 | Not Available | Positive | 1032057 - 1032851 | 30548.0 |
| duf4435 domain-containing protein | DW048_04475 | Not Available | Positive | 1032851 - 1033735 | 34438.2 |
| hypothetical protein | DW048_04480 | Not Available | Positive | 1033935 - 1034129 | 7470.88 |
| hypothetical protein | DW048_04490 | Not Available | Positive | 1035674 - 1035895 | 8816.39 |
| hypothetical protein | DW048_04495 | Not Available | Positive | 1035951 - 1036160 | 7735.89 |
| hypothetical protein | DW048_04505 | Not Available | Positive | 1037363 - 1037728 | 14587.6 |
| hypothetical protein | DW048_04510 | Not Available | Positive | 1038112 - 1038294 | 6880.22 |
| duf3846 domain-containing protein | DW048_04515 | Not Available | Positive | 1038296 - 1038571 | 10234.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

