Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase | DW048_04395 | Not Available | Negative | 1013450 - 1014337 | 32737.7 |
| undecaprenyl-phosphate glucose phosphotransferase | DW048_04400 | Not Available | Negative | 1014373 - 1015776 | 54181.0 |
| mannose-1-phosphate guanylyltransferase | DW048_04405 | Not Available | Positive | 1015890 - 1016954 | 40506.4 |
| gdp-mannose 4,6-dehydratase | DW048_04410 | Not Available | Positive | 1017130 - 1018212 | 41218.5 |
| thiol peroxidase | DW048_04420 | Not Available | Negative | 1019435 - 1019938 | 17976.7 |
| deda family protein | DW048_04425 | Not Available | Negative | 1020007 - 1020633 | 23001.3 |
| tetratricopeptide repeat protein | DW048_04430 | Not Available | Negative | 1020641 - 1022158 | 59232.0 |
| glutamine--trna ligase/yqey domain fusion protein | DW048_04435 | Not Available | Negative | 1022169 - 1023908 | 66876.0 |
| psts family phosphate abc transporter substrate-binding protein | DW048_04440 | Not Available | Negative | 1023966 - 1024784 | 29967.5 |
| phosphate abc transporter atp-binding protein | DW048_04455 | Not Available | Positive | 1027320 - 1028072 | 28140.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

