Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DW048_04325 | Not Available | Negative | 995426 - 996586 | 44313.5 |
| glycosyltransferase | DW048_04330 | Not Available | Negative | 996594 - 997718 | 43036.3 |
| glycosyltransferase family 2 protein | DW048_04335 | Not Available | Negative | 997715 - 998620 | 34487.7 |
| hypothetical protein | DW048_04350 | Not Available | Negative | 1002216 - 1003079 | 32645.0 |
| response regulator | DW048_04360 | Not Available | Negative | 1004297 - 1004662 | 14101.4 |
| nudix hydrolase | DW048_04365 | Not Available | Positive | 1005019 - 1005753 | 28586.5 |
| carbohydrate kinase | DW048_04370 | Not Available | Positive | 1005925 - 1007418 | 53446.7 |
| xylose isomerase | DW048_04375 | Not Available | Positive | 1007511 - 1008827 | 49038.9 |
| capsule biosynthesis protein | DW048_04380 | Not Available | Positive | 1009067 - 1011559 | 92325.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DW048_04390 | Not Available | Negative | 1012881 - 1013450 | 21738.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

