Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | DW048_04190 | Not Available | Negative | 966507 - 968204 | 64741.7 |
| phospholipase | DW048_04195 | Not Available | Negative | 968221 - 969006 | 29317.4 |
| hypothetical | DW048_04200 | Not Available | Negative | 969132 - 970018 | 32495.1 |
| hybrid sensor histidine kinase/response regulator | DW048_04215 | Not Available | Positive | 972036 - 973175 | 42228.6 |
| endonuclease | DW048_04220 | Not Available | Negative | 973180 - 974241 | 40748.7 |
| hybrid sensor histidine kinase/response regulator | DW048_04225 | Not Available | Negative | 974245 - 976095 | 71143.4 |
| response regulator | DW048_04230 | Not Available | Positive | 976239 - 976595 | 13485.5 |
| glycosyltransferase family 2 protein | DW048_04235 | Not Available | Negative | 976599 - 977804 | 46029.0 |
| glycosyltransferase family 1 protein | DW048_04240 | Not Available | Negative | 977801 - 978919 | 42816.1 |
| glycosyltransferase family 2 protein | DW048_04245 | Not Available | Negative | 978926 - 979768 | 32096.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

