Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase type iii | DW048_04135 | Not Available | Positive | 948811 - 951000 | 82007.6 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DW048_04140 | Not Available | Positive | 951314 - 953158 | 67658.3 |
| amidophosphoribosyltransferase | DW048_04145 | Not Available | Positive | 953321 - 955204 | 71311.8 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit | DW048_04150 | Not Available | Positive | 955230 - 956306 | 39950.5 |
| hybrid sensor histidine kinase/response regulator | DW048_04160 | Not Available | Positive | 959768 - 962113 | 89689.5 |
| hsp20/alpha crystallin family protein | DW048_04165 | Not Available | Negative | 962331 - 962774 | 16943.0 |
| hypothetical protein | DW048_04170 | Not Available | Negative | 963039 - 963497 | 17637.3 |
| linear amide c-n hydrolase | DW048_04175 | Not Available | Negative | 963732 - 964790 | 39405.4 |
| hypothetical protein | DW048_04180 | Not Available | Negative | 964949 - 965188 | 9468.92 |
| hpaii family restriction endonuclease | DW048_04185 | Not Available | Positive | 965291 - 966379 | 41342.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

