Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DW048_04015 | Not Available | Positive | 926394 - 927824 | 55427.2 |
| hypothetical protein | DW048_04020 | Not Available | Positive | 927830 - 928450 | 23831.1 |
| hypothetical protein | DW048_04025 | Not Available | Positive | 928447 - 928860 | 16101.3 |
| dna-binding protein | DW048_04030 | Not Available | Positive | 929094 - 929336 | 9464.56 |
| hypothetical protein | DW048_04035 | Not Available | Positive | 929367 - 929840 | 17331.6 |
| hypothetical protein | DW048_04040 | Not Available | Positive | 929952 - 930467 | 19288.9 |
| metalloproteinase | DW048_04045 | Not Available | Positive | 930609 - 931046 | 16695.8 |
| relaxase | DW048_04050 | Not Available | Positive | 931043 - 932275 | 46497.8 |
| hypothetical protein | DW048_04055 | Not Available | Positive | 932282 - 932818 | 19787.2 |
| integrase | DW048_04060 | Not Available | Positive | 932846 - 933268 | 16450.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

