Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DW048_03950 | Not Available | Positive | 914652 - 916316 | 63866.3 |
| xre family transcriptional regulator | DW048_03955 | Not Available | Positive | 916422 - 916703 | 10864.3 |
| hypothetical protein | DW048_03965 | Not Available | Positive | 917429 - 918772 | 50356.8 |
| hypothetical protein | DW048_03970 | Not Available | Positive | 918793 - 919185 | 14845.3 |
| mobilization protein | DW048_03980 | Not Available | Negative | 920100 - 921173 | 40301.8 |
| plasmid mobilization relaxosome protein mobc | DW048_03985 | Not Available | Negative | 921170 - 921520 | 13127.1 |
| dna-binding protein | DW048_03990 | Not Available | Negative | 921695 - 922513 | 30433.8 |
| dna-binding protein | DW048_03995 | Not Available | Negative | 922531 - 922866 | 12759.5 |
| site-specific integrase | DW048_04005 | Not Available | Positive | 923782 - 924924 | 43677.8 |
| site-specific integrase | DW048_04010 | Not Available | Positive | 924939 - 926084 | 43624.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

