Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | DW048_03895 | Not Available | Positive | 899230 - 900528 | 50814.2 |
| integrase | DW048_03900 | Not Available | Positive | 900542 - 901873 | 51934.2 |
| hypothetical protein | DW048_03905 | Not Available | Positive | 901920 - 903062 | 43555.9 |
| dna-binding protein | DW048_03910 | Not Available | Positive | 903283 - 903636 | 13293.1 |
| duf3987 domain-containing protein | DW048_03915 | Not Available | Positive | 903638 - 905044 | 53122.6 |
| hypothetical protein | DW048_03920 | Not Available | Positive | 905179 - 906249 | 40626.8 |
| recombinase | DW048_03925 | Not Available | Positive | 906452 - 907840 | 52524.1 |
| methyltransferase domain-containing protein | DW048_03930 | Not Available | Positive | 908004 - 910070 | 78231.5 |
| duf2075 domain-containing protein | DW048_03935 | Not Available | Positive | 910079 - 911107 | 39585.9 |
| duf1848 domain-containing protein | DW048_03945 | Not Available | Positive | 913597 - 914649 | 40735.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

