Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tram | DW048_03840 | Not Available | Negative | 888830 - 889972 | 42105.6 |
| hypothetical protein | DW048_03845 | Not Available | Negative | 889956 - 890375 | 15874.1 |
| conjugative transposon protein trak | DW048_03850 | Not Available | Negative | 890388 - 891002 | 23705.9 |
| hypothetical protein | DW048_03855 | Not Available | Negative | 891006 - 891407 | 16687.8 |
| hypothetical protein | DW048_03860 | Not Available | Negative | 891473 - 891811 | 12419.2 |
| site-specific integrase | DW048_03865 | Not Available | Positive | 892018 - 893187 | 44258.8 |
| site-specific integrase | DW048_03870 | Not Available | Positive | 893208 - 894365 | 43856.7 |
| hypothetical protein | DW048_03880 | Not Available | Negative | 895394 - 897163 | 68036.8 |
| energy transducer tonb | DW048_03885 | Not Available | Negative | 897174 - 898043 | 32055.6 |
| sh3 domain-containing protein | DW048_03890 | Not Available | Negative | 898108 - 898953 | 31188.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

