Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine-fructose-6-phosphate aminotransferase | DW048_03765 | Not Available | Negative | 872009 - 872350 | 13132.8 |
| tolc family protein | DW048_03770 | Not Available | Negative | 872572 - 873930 | 49501.5 |
| n-acetyltransferase | DW048_03785 | Not Available | Negative | 878202 - 878741 | 21124.1 |
| is982 family transposase | DW048_03790 | Not Available | Positive | 878787 - 879767 | 37607.5 |
| upxy family transcription antiterminator | DW048_03800 | Not Available | Negative | 880539 - 881159 | 24203.4 |
| site-specific integrase | DW048_03805 | Not Available | Negative | 881617 - 882825 | 46044.4 |
| lysozyme | DW048_03810 | Not Available | Negative | 882914 - 883411 | 19375.9 |
| fimbrillin family protein | DW048_03820 | Not Available | Negative | 885734 - 886642 | 33521.3 |
| duf1566 domain-containing protein | DW048_03825 | Not Available | Negative | 886709 - 887374 | 24864.5 |
| conjugative transposon protein tran | DW048_03835 | Not Available | Negative | 887915 - 888760 | 32137.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

