Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease adaptor clps | DW048_03330 | Not Available | Positive | 806917 - 807225 | 12034.5 |
| aaa family atpase | DW048_03335 | Not Available | Positive | 807243 - 809471 | 83028.6 |
| leucyl/phenylalanyl-trna--protein transferase | DW048_03340 | Not Available | Positive | 809567 - 810220 | 24969.1 |
| hypothetical protein | DW048_03345 | Not Available | Positive | 810361 - 811200 | 32320.0 |
| phosphoglycerate mutase family protein | DW048_03355 | Not Available | Positive | 812821 - 813405 | 22921.4 |
| luxr family transcriptional regulator | DW048_03360 | Not Available | Negative | 813423 - 814193 | 29670.7 |
| Trna-pro | Not Available | Not Available | Positive | 816132 - 816204 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 816385 - 816460 | Not Available |
| transposase | DW048_03380 | Not Available | Positive | 816552 - 816836 | 11174.2 |
| hypothetical protein | DW048_03400 | Not Available | Negative | 819652 - 819864 | 8288.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

