Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosidase | DW048_03250 | Not Available | Negative | 784053 - 785054 | 37626.8 |
| glycoside hydrolase family 97 protein | DW048_03260 | Not Available | Negative | 786507 - 788522 | 75818.1 |
| endonuclease | DW048_03265 | Not Available | Negative | 788710 - 789555 | 31930.9 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW048_03270 | Not Available | Negative | 789601 - 791370 | 66871.9 |
| glycoside hydrolase family 92 protein | DW048_03285 | Not Available | Negative | 795085 - 797397 | 87838.7 |
| glycoside hydrolase family 92 protein | DW048_03290 | Not Available | Negative | 797427 - 799709 | 86472.6 |
| duf4974 domain-containing protein | DW048_03295 | Not Available | Negative | 799727 - 800719 | 37968.6 |
| rna polymerase sigma-70 factor | DW048_03300 | Not Available | Negative | 800748 - 801323 | 22518.4 |
| hypothetical protein | DW048_03310 | Not Available | Negative | 803842 - 804537 | 26719.6 |
| general stress protein | DW048_03325 | Not Available | Positive | 806281 - 806688 | 15299.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

