Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DW048_03185 | Not Available | Positive | 767463 - 768809 | 51824.2 |
| hypothetical protein | DW048_03195 | Not Available | Positive | 769097 - 770257 | 44112.8 |
| hypothetical protein | DW048_03200 | Not Available | Positive | 770285 - 770464 | 6528.34 |
| hypothetical protein | DW048_03205 | Not Available | Positive | 770502 - 771116 | 22842.3 |
| wg repeat-containing protein | DW048_03210 | Not Available | Positive | 771135 - 773024 | 72127.7 |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 773130 - 773525 | Not Available |
| tonb-dependent receptor | DW048_03230 | Not Available | Positive | 778074 - 780641 | 97338.0 |
| rna polymerase sigma-70 factor | DW048_03235 | Not Available | Positive | 780696 - 781223 | 20776.9 |
| duf4974 domain-containing protein | DW048_03240 | Not Available | Positive | 781220 - 782230 | 38701.1 |
| glycosyl hydrolase family 109 protein 2 | DW048_03245 | Not Available | Negative | 782353 - 783594 | 47387.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

