Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | DW048_03025 | Not Available | Negative | 722850 - 724733 | 70822.6 |
| alkaline phosphatase | DW048_03030 | Not Available | Negative | 724751 - 725653 | 33069.7 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_03045 | Not Available | Negative | 729102 - 730868 | 67709.4 |
| tonb-dependent receptor | DW048_03050 | Not Available | Negative | 730895 - 733924 | 110512.0 |
| glycoside hydrolase | DW048_03055 | Not Available | Negative | 734754 - 736268 | 55623.5 |
| hypothetical protein | DW048_03060 | Not Available | Positive | 736378 - 736608 | 9123.75 |
| arac family transcriptional regulator | DW048_03065 | Not Available | Negative | 736601 - 737491 | 34355.3 |
| pyrroline-5-carboxylate reductase | DW048_03070 | Not Available | Negative | 737674 - 738447 | 27247.4 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DW048_03075 | Not Available | Negative | 738631 - 739755 | 41008.9 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DW048_03080 | Not Available | Negative | 739769 - 740737 | 36000.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

