Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_02960 | Not Available | Negative | 701832 - 702125 | 11650.8 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW048_02975 | Not Available | Positive | 707755 - 709641 | 72194.3 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW048_02985 | Not Available | Positive | 713283 - 715253 | 74067.4 |
| hypothetical protein | DW048_02990 | Not Available | Negative | 715567 - 716031 | 17273.6 |
| acetyl-coa synthetase | DW048_02995 | Not Available | Negative | 716076 - 717728 | 62326.4 |
| cupin domain-containing protein | DW048_03000 | Not Available | Negative | 717812 - 718366 | 20522.8 |
| duf1893 domain-containing protein | DW048_03005 | Not Available | Negative | 718544 - 718963 | 15747.2 |
| 4fe-4s dicluster domain-containing protein | DW048_03010 | Not Available | Negative | 718981 - 720507 | 55272.3 |
| aldo/keto reductase | DW048_03015 | Not Available | Negative | 720543 - 721925 | 52411.6 |
| hypothetical protein | DW048_03020 | Not Available | Positive | 722162 - 722458 | 11210.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

