Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 2 protein | DW048_02890 | Not Available | Negative | 681682 - 684159 | 93582.9 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_02895 | Not Available | Negative | 684377 - 686428 | 78080.4 |
| site-specific integrase | DW048_02905 | Not Available | Positive | 690330 - 691565 | 47891.2 |
| rhum protein | DW048_02910 | Not Available | Positive | 691577 - 691939 | 13614.5 |
| dna-binding protein | DW048_02915 | Not Available | Negative | 692017 - 692322 | 11724.1 |
| dna-binding protein | DW048_02920 | Not Available | Negative | 692354 - 692653 | 11590.3 |
| hypothetical protein | DW048_02925 | Not Available | Negative | 692659 - 692856 | 7273.61 |
| dna-binding protein | DW048_02930 | Not Available | Positive | 692855 - 693217 | 14059.1 |
| dna-binding protein | DW048_02935 | Not Available | Positive | 693221 - 693571 | 13925.0 |
| duf1896 domain-containing protein | DW048_02950 | Not Available | Positive | 697337 - 697924 | 22268.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

