Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | DW048_02685 | Not Available | Positive | 606156 - 607280 | 43533.9 |
| hypothetical protein | DW048_02690 | Not Available | Positive | 607370 - 608884 | 57726.9 |
| gliding motility lipoprotein gldh | DW048_02695 | Not Available | Positive | 608847 - 609344 | 18709.4 |
| rod shape-determining protein roda | DW048_02700 | Not Available | Negative | 609348 - 610802 | 54268.6 |
| penicillin-binding protein 2 | DW048_02705 | Not Available | Negative | 610783 - 612633 | 69195.5 |
| rod shape-determining protein mred | DW048_02710 | Not Available | Negative | 612633 - 613133 | 18956.0 |
| rod shape-determining protein mrec | DW048_02715 | Not Available | Negative | 613142 - 613990 | 31395.4 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | DW048_02725 | Not Available | Negative | 615229 - 616752 | 56222.2 |
| inorganic phosphate transporter | DW048_02730 | Not Available | Positive | 617033 - 619285 | 83827.5 |
| aminoglycoside phosphotransferase | DW048_02735 | Not Available | Positive | 619393 - 620475 | 41591.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

