Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| noncanonical pyrimidine nucleotidase, yjjg family | DW048_02635 | Not Available | Negative | 597988 - 598677 | 26926.8 |
| hypothetical protein | DW048_02640 | Not Available | Negative | 598753 - 599601 | 31533.4 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DW048_02645 | Not Available | Negative | 599630 - 600304 | 24887.2 |
| thymidine kinase | DW048_02650 | Not Available | Positive | 600509 - 601108 | 22372.9 |
| ai-2e family transporter | DW048_02655 | Not Available | Positive | 601119 - 602255 | 42730.1 |
| Trna-lys | Not Available | Not Available | Positive | 602347 - 602422 | Not Available |
| hypothetical protein | DW048_02665 | Not Available | Negative | 602767 - 603018 | 9699.76 |
| hypothetical protein | DW048_02670 | Not Available | Negative | 603061 - 603156 | 3271.89 |
| cardiolipin synthase | DW048_02675 | Not Available | Positive | 603524 - 604819 | 49710.2 |
| methylenetetrahydrofolate reductase | DW048_02680 | Not Available | Positive | 605175 - 606128 | 36181.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

