Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_02395 | Not Available | Negative | 539180 - 539728 | 20508.7 |
| phosphohydrolase | DW048_02400 | Not Available | Negative | 539725 - 540426 | 27543.0 |
| lipoyl(octanoyl) transferase lipb | DW048_02405 | Not Available | Positive | 540492 - 541580 | 40847.7 |
| long-chain fatty acid--coa ligase | DW048_02410 | Not Available | Negative | 541790 - 543454 | 62496.0 |
| hypothetical protein | DW048_02415 | Not Available | Negative | 543666 - 544148 | 18372.9 |
| hypothetical protein | DW048_02420 | Not Available | Positive | 544395 - 544709 | 11444.2 |
| hypothetical protein | DW048_02425 | Not Available | Positive | 544878 - 545087 | 7947.52 |
| Trna-ala | Not Available | Not Available | Positive | 545741 - 545814 | Not Available |
| duf4286 family protein | DW048_02435 | Not Available | Positive | 545877 - 546182 | 11925.3 |
| crossover junction endodeoxyribonuclease ruvc | DW048_02440 | Not Available | Positive | 546179 - 546748 | 21117.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

