Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_02335 | Not Available | Negative | 522962 - 523543 | 23391.4 |
| hypothetical protein | DW048_02340 | Not Available | Negative | 523549 - 524772 | 48490.2 |
| formate--tetrahydrofolate ligase | DW048_02350 | Not Available | Positive | 526348 - 528015 | 60542.1 |
| hypothetical protein | DW048_02355 | Not Available | Negative | 528047 - 528274 | 8214.64 |
| hypothetical protein | DW048_02360 | Not Available | Positive | 528398 - 528634 | 8867.62 |
| s9 family peptidase | DW048_02365 | Not Available | Positive | 528667 - 531381 | 102690.0 |
| glycine dehydrogenase (aminomethyl-transferring) | DW048_02370 | Not Available | Negative | 531662 - 534511 | 105238.0 |
| mbl fold metallo-hydrolase | DW048_02375 | Not Available | Negative | 534547 - 535185 | 23832.3 |
| duf3298 domain-containing protein | DW048_02385 | Not Available | Negative | 535852 - 536700 | 32057.1 |
| cu(2+)-exporting atpase | DW048_02390 | Not Available | Positive | 536879 - 539092 | 79856.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

