Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit gamma | DW048_02275 | Not Available | Positive | 505955 - 506824 | 32458.6 |
| class i sam-dependent methyltransferase | DW048_02280 | Not Available | Negative | 506911 - 507645 | 27872.3 |
| vwa domain-containing protein | DW048_02290 | Not Available | Positive | 509488 - 510801 | 51547.8 |
| porin | DW048_02295 | Not Available | Positive | 510945 - 512096 | 43058.9 |
| 2-aminoethylphosphonate--pyruvate transaminase | DW048_02300 | Not Available | Negative | 512164 - 513189 | 38436.1 |
| phosphonoacetaldehyde hydrolase | DW048_02305 | Not Available | Negative | 513258 - 514046 | 29165.4 |
| hypothetical protein | DW048_02310 | Not Available | Negative | 514089 - 515447 | 51090.7 |
| hypothetical protein | DW048_02315 | Not Available | Positive | 515694 - 516572 | 33621.2 |
| hypothetical protein | DW048_02320 | Not Available | Negative | 516649 - 516780 | 4716.73 |
| helicase | DW048_02325 | Not Available | Negative | 516952 - 519009 | 79335.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

