Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-2,3-diacylglucosamine diphosphatase | DW048_02220 | Not Available | Positive | 495692 - 496495 | 31121.0 |
| glycosyltransferase | DW048_02225 | Not Available | Positive | 496492 - 497619 | 43524.5 |
| peptidase m28 | DW048_02230 | Not Available | Positive | 497822 - 499369 | 57370.0 |
| atp synthase subunit beta | DW048_02235 | Not Available | Positive | 499565 - 501100 | 56123.4 |
| hypothetical protein | DW048_02240 | Not Available | Positive | 501109 - 501363 | 9226.99 |
| hypothetical protein | DW048_02245 | Not Available | Positive | 501373 - 501786 | 16367.0 |
| atp synthase f0 subunit a | DW048_02250 | Not Available | Positive | 501788 - 502879 | 40577.2 |
| atp synthase subunit b | DW048_02260 | Not Available | Positive | 503175 - 503675 | 18885.0 |
| f0f1 atp synthase subunit delta | DW048_02265 | Not Available | Positive | 503681 - 504238 | 21031.8 |
| atp synthase subunit alpha | DW048_02270 | Not Available | Positive | 504360 - 505952 | 57717.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

