Phocaeicola vulgatus strain AF41-8MH

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus strain AF41-8MH is a Gram-positive, rod-shaped anaerobic bacterium that occurs as single cells and is associated with host environments. This strain, belonging to the genus Phocaeicola, is characterized by its specific habitat, suggesting a potential symbiotic relationship with its host. As an anaerobe, P. vulgatus strain AF41-8MH thrives in oxygen-depleted conditions, which is typical for many gut microbiota members, potentially playing a role in the fermentation processes within the host's digestive system. The presence of this strain in a host-associated environment indicates its possible involvement in the complex interactions of microbial communities, contributing to the overall metabolic activities and health of the host. Further investigation into P. vulgatus strain AF41-8MH could provide insights into its specific functions within these microbial ecosystems and its interactions with other microbial species, which may illuminate its role in maintaining host homeostasis. Understanding its ecological niche could also shed light on the broader implications of anaerobic bacteria in host-associated microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus strain AF41-8MH
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus strain AF41-8MH

Accession NumberQRNW00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
atp-binding proteinDW048_00015Not Available+3767 - 538060713.8
hsdr family type i site-specific deoxyribonucleaseDW048_00020Not Available+5382 - 8513119544.0
Ncrna_class:rnase_p_rnaNot AvailableNot Available+6993 - 7362Not Available
m48 family peptidaseDW048_00025Not Available+8513 - 920827362.5
mobilization proteinDW048_00030Not Available-10230 - 1130040203.8
dna-binding proteinDW048_00035Not Available-11305 - 1167914312.3
hypothetical proteinDW048_00040Not Available-11753 - 1254429786.3
site-specific integraseDW048_00045Not Available-12713 - 1382843610.5
dna-binding proteinDW048_00050Not Available-13948 - 1482334862.1
hypothetical proteinDW048_00055Not Available+15165 - 153717721.32

Displaying genes 31 – 40 of 3755 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites