Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_02150 | Not Available | Positive | 481255 - 481452 | 7902.13 |
| Trna-asp | Not Available | Not Available | Positive | 481430 - 481503 | Not Available |
| hypothetical protein | DW048_02165 | Not Available | Negative | 483079 - 483537 | 17855.5 |
| glycoside hydrolase family 95 protein | DW048_02175 | Not Available | Positive | 484100 - 486541 | 91073.4 |
| iron-sulfur cluster repair di-iron protein | DW048_02180 | Not Available | Negative | 486638 - 487369 | 27881.1 |
| hydroxylamine reductase | DW048_02185 | Not Available | Negative | 487381 - 489039 | 61190.4 |
| crp/fnr family transcriptional regulator | DW048_02190 | Not Available | Positive | 489154 - 489744 | 21991.1 |
| arylsulfatase | DW048_02195 | Not Available | Negative | 490030 - 491577 | 56944.6 |
| dna-binding response regulator | DW048_02205 | Not Available | Positive | 493012 - 493689 | 25927.3 |
| hypothetical protein | DW048_02215 | Not Available | Positive | 495078 - 495515 | 16870.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

