Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | DW048_23490 | Not Available | Negative | 5311822 - 5312220 | 14892.7 |
| hypothetical protein | DW048_23495 | Not Available | Positive | 5312563 - 5312775 | 8656.89 |
| hypothetical protein | DW048_23500 | Not Available | Positive | 5312781 - 5313449 | 24898.0 |
| transposase family protein | DW048_23515 | Not Available | Negative | 5315267 - 5315529 | 10193.4 |
| dde transposase | DW048_23520 | Not Available | Negative | 5316136 - 5316980 | 32657.3 |
| transposase | DW048_23545 | Not Available | Positive | 5319347 - 5320081 | 28352.6 |
| mobilization protein | DW048_23550 | Not Available | Negative | 5320082 - 5320156 | 2702.3 |
| duf3408 domain-containing protein | DW048_23555 | Not Available | Negative | 5320187 - 5320681 | 18532.7 |
| arac family transcriptional regulator | DW048_23565 | Not Available | Negative | 5321636 - 5322121 | 19011.1 |
| site-specific integrase | DW048_23570 | Not Available | Positive | 5322201 - 5322862 | 26299.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

