Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_23330 | Not Available | Positive | 5290221 - 5290433 | 7943.69 |
| site-specific integrase | DW048_23340 | Not Available | Negative | 5290890 - 5291087 | 7301.86 |
| hypothetical protein | DW048_23355 | Not Available | Positive | 5292701 - 5293612 | 35311.9 |
| glycosyltransferase | DW048_23360 | Not Available | Positive | 5293626 - 5293988 | 13902.9 |
| site-specific integrase | DW048_23365 | Not Available | Positive | 5294038 - 5294429 | 14808.8 |
| site-specific integrase | DW048_23375 | Not Available | Positive | 5295507 - 5295898 | 14850.9 |
| site-specific integrase | DW048_23385 | Not Available | Negative | 5297041 - 5298201 | 44958.7 |
| n-acetyltransferase | DW048_23400 | Not Available | Positive | 5301054 - 5301150 | 3879.6 |
| hypothetical protein | DW048_23410 | Not Available | Negative | 5301892 - 5302083 | 7352.87 |
| glycosyltransferase family 1 protein | DW048_23420 | Not Available | Negative | 5302436 - 5303581 | 44751.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

