Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_23245 | Not Available | Positive | 5278897 - 5279724 | 31907.4 |
| hypothetical protein | DW048_23270 | Not Available | Negative | 5283505 - 5284532 | 40058.0 |
| glycosyltransferase | DW048_23275 | Not Available | Negative | 5284532 - 5285041 | 19882.0 |
| hypothetical protein | DW048_23285 | Not Available | Negative | 5285534 - 5285728 | 7558.34 |
| sigma-70 family rna polymerase sigma factor | DW048_23295 | Not Available | Negative | 5286313 - 5286586 | 10615.9 |
| group ii intron reverse transcriptase/maturase | DW048_23300 | Not Available | Negative | 5286587 - 5287547 | 36685.7 |
| hypothetical protein | DW048_23305 | Not Available | Negative | 5287513 - 5287716 | 7680.18 |
| antibiotic acetyltransferase | DW048_23315 | Not Available | Positive | 5288632 - 5289294 | 24794.2 |
| hypothetical protein | DW048_23320 | Not Available | Positive | 5289284 - 5289599 | 12393.9 |
| n-acetyltransferase | DW048_23325 | Not Available | Negative | 5289612 - 5290211 | 23385.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

