Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4248 domain-containing protein | DW048_23155 | Not Available | Positive | 5261402 - 5261608 | 7792.31 |
| n-acetylmuramoyl-l-alanine amidase | DW048_23165 | Not Available | Positive | 5262497 - 5263102 | 23255.8 |
| hypothetical protein | DW048_23170 | Not Available | Positive | 5263401 - 5263646 | 9618.69 |
| repa protein | DW048_23185 | Not Available | Negative | 5265540 - 5266136 | 22934.6 |
| mobilization protein | DW048_23190 | Not Available | Negative | 5266602 - 5267044 | 16895.3 |
| dde transposase | DW048_23195 | Not Available | Positive | 5267177 - 5268535 | 52756.4 |
| hypothetical protein | DW048_23200 | Not Available | Negative | 5268803 - 5270320 | 56969.0 |
| hypothetical protein | DW048_23210 | Not Available | Positive | 5271700 - 5271984 | 10274.0 |
| acetyltransferase | DW048_23225 | Not Available | Negative | 5274828 - 5275451 | 23095.5 |
| atp-dependent helicase | DW048_23235 | Not Available | Negative | 5275525 - 5277177 | 62471.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

