Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4 family transposase | DW048_23020 | Not Available | Negative | 5241008 - 5242492 | 57099.6 |
| n-acetyltransferase | DW048_23025 | Not Available | Negative | 5242597 - 5242693 | 3879.6 |
| mobilization protein | DW048_23030 | Not Available | Positive | 5242694 - 5242944 | 9443.26 |
| plasmid mobilization relaxosome protein mobc | DW048_23035 | Not Available | Positive | 5242892 - 5243296 | 15201.9 |
| mobilization protein | DW048_23040 | Not Available | Positive | 5243271 - 5244221 | 36224.3 |
| sigma-70 family rna polymerase sigma factor | DW048_23055 | Not Available | Positive | 5245684 - 5245957 | 10658.0 |
| hypothetical protein | DW048_23060 | Not Available | Negative | 5246119 - 5246559 | 16185.7 |
| hypothetical protein | DW048_23065 | Not Available | Negative | 5246532 - 5246717 | 6793.3 |
| hypothetical protein | DW048_23070 | Not Available | Positive | 5246727 - 5247011 | 10912.4 |
| dna-binding protein | DW048_23075 | Not Available | Negative | 5246911 - 5247234 | 12499.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

